Connectome Viewer Documentation

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Connectome Viewer is built using Enthought Envisage, a very powerful application architecture, which allows for seamless integration of plugins and services.

If you would like to develop a plugin for Connectome Viewer, there are external tutorials or you can look at the source code in the plugin folder. Feel free to contact us if you have any questions or would like to add a plugin to the list.

Network Based Statistic Plugin

Summary: Computes the network-based statistic (NBS) as described in the reference.

Status: Integrated in Current Release

Tutorial: Network Based Statistics for Group Comparison

Reference: Zalesky A, Fornito A, Bullmore ET (2010) Network-based statistic: Identifying differences in brain networks. NeuroImage. 10.1016/j.neuroimage.2010.06.041

Author: Original code written by Andrew Zalesky, rewritten for Python by Stephan Gerhard.

Bindings Plugin

Summary: This exposes the currently loaded connectome file to the Python Shell by adding the reference cfile to its name space.

Status: Integrated in Current Release

Author: Stephan Gerhard

TextEditor Plugin

Summary: This includes a straightforward text editor with Python syntax-highlighting to easily write scripts. You can run the scripts by pressing Ctrl-R. See File menu to open and save files.

Status: Integrated in Current Release

Author: Derived from the Enthought Envisage Text Editor Plugin.